Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Experiments
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[Homology]
Score
DR_2298Conserved hypothetical protein; Similar to PID:2213500 GB:AL123456 percent identity: 48.44; identified by sequence similarity; putative. (165 aa)    
Predicted Functional Partners:
DR_2297
Hypothetical protein; Identified by Glimmer2; putative.
       0.835
DR_2296
Glucokinase; Similar to GB:X65932 SP:P40184 PID:46851 percent identity: 57.24; identified by sequence similarity; putative.
       0.818
DR_2299
GGDEF family protein; Similar to SP:P55552 PID:2182511 percent identity: 54.56; identified by sequence similarity; putative.
       0.727
DR_2295
Hypothetical protein; Identified by Glimmer2; putative.
       0.644
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
       0.513
DR_2294
Periplasmic divalent cation tolerance protein; Similar to GB:AE000657 percent identity: 71.43; identified by sequence similarity; putative.
       0.504
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.492
DR_2301
Hypothetical protein; Identified by Glimmer2; putative.
       0.465
DR_0876
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.445
DR_1945
Malonyl CoA-acyl carrier protein transacylase; Similar to GB:M87040 SP:P25715 GB:Z11565 PID:145887 PID:41364 percent identity: 63.37; identified by sequence similarity; putative.
  
  
 0.441
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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