STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_2452Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 48.12; identified by sequence similarity; putative. (68 aa)    
Predicted Functional Partners:
DR_2453
Cation-transporting ATPase; Similar to PID:1353678 percent identity: 72.61; identified by sequence similarity; putative.
 
 
 0.873
DR_2449
Conserved hypothetical protein; Similar to GB:U00096 SP:P76424 PID:1788422 percent identity: 63.54; identified by sequence similarity; putative.
  
  
 0.860
DR_2451
Conserved hypothetical protein; Similar to PID:1001780 PID:1001829 percent identity: 55.47; identified by sequence similarity; putative.
  
    0.788
DR_2450
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
DR_A0073
Cation-transporting P-type ATPase; Similar to SP:P37617 PID:466605 GB:U00096 PID:1789879 percent identity: 66.72; identified by sequence similarity; putative.
  
 
 0.697
crcB
Hypothetical protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
      
 0.658
DR_A0202
Superoxide dismutase (sodC), Cu-Zn family; Similar to SP:P15453 percent identity: 54.55; identified by sequence similarity; putative.
  
 0.598
sodC
Superoxide dismutase (sodC), Cu-Zn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems.
   
 0.595
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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