STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_2466Conserved hypothetical protein; Similar to GB:AE000520 percent identity: 46.84; identified by sequence similarity; putative. (227 aa)    
Predicted Functional Partners:
DR_2465
Serine-pyruvate aminotransferase; Similar to SP:P31029 percent identity: 48.54; identified by sequence similarity; putative.
       0.773
DR_2467
Hypothetical protein; Identified by Glimmer2; putative.
       0.663
DR_2262
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.548
DR_1804
Conserved hypothetical protein; Similar to SP:P38522 GB:U00096 PID:1742120 PID:1742129 PID:1787557 percent identity: 50.63; identified by sequence similarity; putative.
  
     0.504
DR_0276
Conserved hypothetical protein; Similar to SP:P54471 PID:1303835 GB:AL009126 percent identity: 52.49; identified by sequence similarity; putative.
  
  
 0.494
DR_A0006
Conserved hypothetical protein; Similar to PID:1653488 percent identity: 48.46; identified by sequence similarity; putative.
  
     0.438
DR_2464
Peptidyl-prolyl cis-trans isomerase, FKBP-type; Similar to GB:L42023 SP:P44830 PID:1005610 PID:1220784 PID:1204949 percent identity: 61.64; identified by sequence similarity; putative.
       0.433
uvsE
UV damage endonuclease, putative; Component in a DNA repair pathway. Removal of UV LIGHT damaged nucleotides. Recognizes pyrimidine dimers and cleave a phosphodiester bond immediately 5' to the lesion. Belongs to the uve1/UvsE family.
  
     0.420
hisC
Histidinol-phosphate aminotransferase; Similar to GB:AE000657 percent identity: 54.20; identified by sequence similarity; putative; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
  
  
 0.407
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.