STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_2467Hypothetical protein; Identified by Glimmer2; putative. (168 aa)    
Predicted Functional Partners:
DR_2466
Conserved hypothetical protein; Similar to GB:AE000520 percent identity: 46.84; identified by sequence similarity; putative.
       0.650
DR_2465
Serine-pyruvate aminotransferase; Similar to SP:P31029 percent identity: 48.54; identified by sequence similarity; putative.
       0.619
DR_1917
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.596
DR_2073
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.423
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.