STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_2470Biotin synthase, putative; Similar to GB:M29292 SP:P19207 SP:P22819 PID:142590 PID:520749 percent identity: 64.12; identified by sequence similarity; putative. (229 aa)    
Predicted Functional Partners:
DR_2468
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 61.69; identified by sequence similarity; putative.
 
 0.999
DR_2469
ABC transporter, ATP-binding protein; Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity).
 
 
 0.997
DR_A0269
Hypothetical protein; Identified by Glimmer2; putative.
 
 
 0.988
DR_2341
birA bifunctional protein; Similar to SP:P42975 PID:1146239 PID:755608 PID:773349 GB:AL009126 percent identity: 100.00; identified by sequence similarity; putative.
 
   
 0.769
acsA
acetyl-CoA synthase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
     
 0.560
DR_A0121
Aminotransferase, class III; Similar to GB:AL009126 percent identity: 60.99; identified by sequence similarity; putative; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.449
DR_2472
Conserved hypothetical protein; Similar to GB:AE000520 percent identity: 48.59; identified by sequence similarity; putative.
       0.417
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.