STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_2546Conserved hypothetical protein; Similar to GB:U00096 PID:1788385 percent identity: 47.05; identified by sequence similarity; putative. (679 aa)    
Predicted Functional Partners:
rsr
Ribonucleoprotein Ro/SS-A-related protein; Binds to several small RNAs that accumulate during recovery from UV irradiation. Contributes to the resistance of D.radiodurans to ultraviolet irradiation. Belongs to the Ro 60 kDa family.
  
     0.520
DR_2545
Conserved hypothetical protein; Similar to GB:AE000511 PID:2313904 percent identity: 54.58; identified by sequence similarity; putative.
       0.490
DR_2544
Hypothetical protein; Identified by Glimmer2; putative.
       0.488
DR_1143
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.476
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
       0.439
DR_A0333
FraH-related protein; Similar to SP:P46017 PID:556608 percent identity: 49.49; identified by sequence similarity; putative.
  
     0.406
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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