STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argD4-aminobutyrate aminotransferase; Similar to GB:Pyro_h percent identity: 65.65; identified by sequence similarity; putative; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (454 aa)    
Predicted Functional Partners:
DR_A0003
Succinate-semialdehyde dehydrogenase; Similar to GB:M88334 SP:P25526 PID:147901 GB:U00096 PID:1789015 percent identity: 69.60; identified by sequence similarity; putative.
 
 0.934
DR_A0126
Aldehyde dehydrogenase; Similar to PID:1871596 GB:AL123456 percent identity: 63.42; identified by sequence similarity; putative; Belongs to the aldehyde dehydrogenase family.
 
 0.934
ssdA
Succinic-semialdehyde dehydrogenase, putative; Catalyzes the NADP(+) dependent oxidation of succinate semialdehyde to succinate.
 
 0.934
DR_0651
Arginase; Similar to SP:P53608 PID:1276985 percent identity: 68.79; identified by sequence similarity; putative; Belongs to the arginase family.
 
 
 0.918
panD
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
     
 0.913
panC
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
     
 0.906
DR_A0030
1-pyrroline-5-carboxylate dehydrogenase, putative; Similar to GB:X73124 SP:P39634 PID:414000 GB:AL009126 percent identity: 65.56; identified by sequence similarity; putative; Belongs to the aldehyde dehydrogenase family.
 
 0.848
DR_A0027
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 69.95; identified by sequence similarity; putative.
     
 0.745
DR_A0028
Hypothetical protein; Identified by Glimmer2; putative.
       0.678
DR_0813
1-pyrroline-5-carboxylate dehydrogenase; Similar to GB:X73124 SP:P39634 PID:414000 GB:AL009126 percent identity: 70.70; identified by sequence similarity; putative.
 
 0.672
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.