STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_A0130Methyltransferase, putative; Similar to PID:998362 percent identity: 58.78; identified by sequence similarity; putative. (198 aa)    
Predicted Functional Partners:
DR_A0132
Hypothetical protein; Identified by Glimmer2; putative.
     0.979
DR_A0133
acyl-CoA dehydrogenase, putative; Similar to GP:2634209 percent identity: 44.17; identified by sequence similarity; putative.
    0.944
DR_A0287
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.777
DR_A0129
Conserved hypothetical protein; Similar to PID:887825 GB:U00096 PID:1789240 percent identity: 48.97; identified by sequence similarity; putative.
       0.565
DR_A0128
Hypothetical protein; Identified by Glimmer2; putative.
       0.561
DR_A0131
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 53.48; identified by sequence similarity; putative.
       0.556
DR_A0127
GMC oxidoreductase; Similar to SP:P55582 PID:2182545 percent identity: 48.31; identified by sequence similarity; putative.
 
     0.454
DR_1181
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.446
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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