STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_A0203Oxidoreductase, putative; Similar to GB:AE000783 percent identity: 52.37; identified by sequence similarity; putative. (443 aa)    
Predicted Functional Partners:
DR_A0202
Superoxide dismutase (sodC), Cu-Zn family; Similar to SP:P15453 percent identity: 54.55; identified by sequence similarity; putative.
     
 0.848
DR_A0205
Sensor histidine kinase; Similar to GB:AE000782 percent identity: 66.53; identified by sequence similarity; putative.
       0.713
DR_A0204
Response regulator; Similar to GB:AE000666 percent identity: 66.42; identified by sequence similarity; putative.
       0.701
nadE
NH3-dependent NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.
  
    0.572
DR_A0206
Oligoendopeptidase F, putative; Similar to GB:AE000520 percent identity: 43.92; identified by sequence similarity; putative.
       0.470
mqnD
Conserved hypothetical protein; Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2); Belongs to the MqnA/MqnD family. MqnD subfamily.
       0.453
DR_1014
Vanadium chloroperoxidase-related protein; Similar to GP:1888406 percent identity: 57.35; identified by sequence similarity; putative.
  
     0.431
DR_A0076
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.407
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.