STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hmpFlavohemoprotein; Similar to PID:1063247 SP:P49852 GB:AL009126 percent identity: 64.34; identified by sequence similarity; putative; In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (403 aa)    
Predicted Functional Partners:
DR_1051
Conserved hypothetical protein; Similar to GP:3449277 percent identity: 58.43; identified by sequence similarity; putative.
    
 0.906
DR_1883
Conserved hypothetical protein; Similar to GP:3449277 percent identity: 58.24; identified by sequence similarity; putative.
    
 0.906
DR_A0244
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 54.87; identified by sequence similarity; putative.
     
 0.873
DR_A0242
Conserved hypothetical protein; Similar to SP:P21498 PID:537019 GB:U00096 PID:1790621 percent identity: 54.69; identified by sequence similarity; putative.
     
 0.735
DR_2620
Cytochrome c oxidase, subunit I; Similar to GB:M84341 SP:P98005 PID:155083 percent identity: 74.43; identified by sequence similarity; putative; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.732
DR_0397
Molybdopterin oxidoreductase; Similar to GB:AL009126 percent identity: 57.19; identified by sequence similarity; putative; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
 0.696
DR_A0354
Methyl-accepting chemotaxis protein; Similar to PID:1652103 percent identity: 52.14; identified by sequence similarity; putative.
     
 0.641
DR_A0011
uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase; Similar to GB:D28503 PID:460693 percent identity: 56.88; identified by sequence similarity; putative.
  
    0.585
DR_1002
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 65.87; identified by sequence similarity; putative.
  
  
 0.568
DR_2607
Molybdenum cofactor biosynthesis protein D/E; Similar to GB:AL123456 percent identity: 53.92; identified by sequence similarity; putative.
   
 
 0.542
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.