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hmp protein (Deinococcus radiodurans) - STRING interaction network
"hmp" - Flavohemoprotein in Deinococcus radiodurans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hmpFlavohemoprotein; Similar to PID-1063247 SP-P49852 GB-AL009126 percent identity- 64.34; identified by sequence similarity; putative; Belongs to the globin family. Two-domain flavohemoproteins subfamily (403 aa)    
Predicted Functional Partners:
ispG
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin); Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate; Belongs to the IspG family (429 aa)
       
      0.973
thiG
Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S (288 aa)
           
  0.887
DR_1051
Uncharacterized protein; Similar to GP-3449277 percent identity- 58.43; identified by sequence similarity; putative (181 aa)
       
  0.884
DR_1883
Uncharacterized protein; Similar to GP-3449277 percent identity- 58.24; identified by sequence similarity; putative (226 aa)
       
  0.874
DR_A0242
Uncharacterized protein; Similar to SP-P21498 PID-537019 GB-U00096 PID-1790621 percent identity- 54.69; identified by sequence similarity; putative (149 aa)
   
   
  0.862
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (392 aa)
         
  0.822
DR_1002
Uncharacterized protein; Similar to GB-AL009126 percent identity- 65.87; identified by sequence similarity; putative (149 aa)
 
   
  0.820
DR_2565
Iron-sulfur binding reductase, putative; Similar to GB-AE000782 percent identity- 54.75; identified by sequence similarity; putative (1132 aa)
   
   
  0.725
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism (436 aa)
     
 
  0.700
DR_0966
5-methyltetrahydrofolate--homocysteine methyltransferase; Similar to GB-U00006 SP-P13009 GB-J04975 GB-X16584 PID-304910 percent identity- 74.38; identified by sequence similarity; putative (1258 aa)
         
  0.693
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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