STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_A0257Ankyrin-related protein; Similar to PID:1881698 percent identity: 58.82; identified by sequence similarity; putative. (180 aa)    
Predicted Functional Partners:
DR_0042
Hypothetical protein; Identified by Glimmer2; putative.
   
 0.880
DR_A0258
Hypothetical protein; Identified by Glimmer2; putative.
       0.757
DR_0420
ATP-dependent helicase; Similar to SP:P37024 PID:473807 PID:473806 GB:U00096 PID:1488196 percent identity: 62.89; identified by sequence similarity; putative.
    
 0.733
DR_0648
Hypothetical protein; Identified by Glimmer2; putative.
  
 0.725
DR_1200
Hypothetical protein; Identified by Glimmer2; putative.
  
 0.725
DR_0436
Cytochrome B6; Similar to SP:P28056 PID:38963 percent identity: 54.09; identified by sequence similarity; putative.
   
 0.677
DR_0569
Hypothetical protein; Identified by Glimmer2; putative.
    
 0.673
DR_1820
Hypothetical protein; Identified by Glimmer2; putative.
    
 0.673
DR_A0259
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.662
DR_0402
Conserved hypothetical protein; Similar to SP:Q10645 PID:1340100 GB:AL123456 percent identity: 49.61; identified by sequence similarity; putative.
    
 0.655
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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