STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_A0302Hypothetical protein; Identified by Glimmer2; putative. (307 aa)    
Predicted Functional Partners:
DR_A0301
Methylamine utilization protein; Similar to GB:L26406 PID:551315 SP:Q49128 percent identity: 56.46; identified by sequence similarity; putative.
 
     0.928
DR_A0300
Hypothetical protein; Identified by Glimmer2; putative.
       0.752
DR_A0303
Hypothetical protein; Identified by Glimmer2; putative.
       0.752
DR_A0299
Copper resistance protein, putative; Similar to PID:619130 percent identity: 53.91; identified by sequence similarity; putative.
       0.723
DR_A0298
Hypothetical protein; Identified by Glimmer2; putative.
       0.605
DR_A0304
Conserved hypothetical protein; Similar to PID:1707680 percent identity: 60.68; identified by sequence similarity; putative.
       0.520
DR_2162
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 46.15; identified by sequence similarity; putative.
  
     0.513
ssb
Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism (By similarity). Essential for ionizing radiation resistance. Stimulates the 5'-3' DNA helicase activity of RecD-like helicase. Stimulates RecA protein- promoted DNA three-strand exchange reactions in vitro with both D.radiodurans and E.coli-derived RecA. Complements an ssb deletion in E.coli, but does not complement a ddrb disruption in D.radiodurans.
      
 0.450
DR_2599
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.447
DR_0210
Conserved hypothetical protein; Similar to GB:AE000657 percent identity: 52.38; identified by sequence similarity; putative.
  
     0.417
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.