Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GSU0050HIRAN domain protein. (132 aa)    
Predicted Functional Partners:
cas3-1
CRISPR-associated helicase Cas3.
 
    0.840
csb1
CRISPR-associated protein Csb1.
 
    0.832
csb2
CRISPR-associated protein Csb2.
 
    0.804
csx14
CRISPR-associated protein.
  
    0.792
flgC
Flagellar basal body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
 
 0.721
GSU0049
Hypothetical protein.
  
    0.577
GSU0972
ATPase, AAA family.
   
 0.541
GSU2745
ATPase, AAA family.
   
 0.541
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 
 0.504
GSU0709
Hypothetical protein.
   
 
 0.500
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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