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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU0066Peroxiredoxin-like 2 family protein, selenocysteine-containing. (235 aa)    
Predicted Functional Partners:
GSU2667
Sensor histidine kinase, PAS domain-containing; Domains: PAS, HisKA, HATPase_c.
   
    0.883
can-1
Carbonic anhydrase, beta-family, clade B.
  
    0.794
GSU3252
Sensor histidine kinase, GAF domain-containing; Domains: GAF, HisKA, HATPase_c.
   
    0.631
GSU0070
Oxidoreductase, membrane subunit.
  
    0.575
GSU3473
Hypothetical protein.
       0.568
GSU0068
Cytochrome c; 4 heme-binding sites.
  
    0.546
GSU0069
Oxidoreductase, iron-sulfur cluster-binding subunit.
  
  
 0.528
flgC
Flagellar basal body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
   0.499
GSU3014
Metal-dependent phosphohydrolase, HDOD domain-containing; Domains: HDOD.
   
    0.483
GSU3251
Protein of unknown function, DUF523 and DUF1722.
   
    0.465
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.