Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GSU0076Hypothetical protein. (199 aa)    
Predicted Functional Partners:
GSU0077
Hypothetical protein.
  
    0.568
GSU0075
SDR_a2 family oxidoreductase, putative.
  
    0.567
GSU0078
PilZ domain protein.
  
    0.557
GSU3252
Sensor histidine kinase, GAF domain-containing; Domains: GAF, HisKA, HATPase_c.
   
    0.528
elbB
Isoprenoid biosynthesis amidotransferase-like protein ElbB.
  
    0.416
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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