Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
degQPeriplasmic trypsin-like serine protease lipoprotein DegQ; Belongs to the peptidase S1C family. (471 aa)    
Predicted Functional Partners:
rpoE
RNA polymerase sigma-24 factor, putative; Belongs to the sigma-70 factor family. ECF subfamily.
  
  
 0.736
GSU0081
Hypothetical protein.
  
  
 0.711
fabD-1
malonyl-CoA--acyl carrier protein transacylase.
 
  
 0.645
GSU1377
enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
    
 0.631
nhaA
Sodium/proton antiporter family protein; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.
  
  
 0.625
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.622
GSU3022
SAM-dependent methyltransferase, putative.
   
 0.622
fabD-2
malonyl-CoA--acyl carrier protein transacylase.
  
  
 0.597
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.583
GSU1655
Response receiver sensor histidine kinase response regulator, PAS and GAF domain-containing; Domains: REC, PAS, GAF, HisKA, HATPase_c, REC.
  
  
 0.583
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.