Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hdrEHeterodisulfide oxidoreductase, iron-sulfur cluster-binding subunit E. (334 aa)    
Predicted Functional Partners:
hdrF
Heterodisulfide oxidoreductase, NAD(P)H oxidoreductase subunit F.
  
 0.997
hdrD
Heterodisulfide oxidoreductase, iron-sulfur cluster-binding subunit D.
 
 
 0.996
hdrA
Heterodisulfide oxidoreductase, FAD-binding and iron-sulfur cluster-binding subunit A.
 
  
 0.958
hdrB
Heterodisulfide oxidoreductase, CCG domain pair-containing subunit B.
 
 
 0.944
hdrG
Heterodisulfide oxidoreductase, iron-sulfur cluster-binding subunit G.
 
  
 0.939
hdrC
Heterodisulfide oxidoreductase, iron-sulfur cluster-binding subunit C.
 
  
 0.938
GSU1620
Protein of unknown function, DUF162 and CCG domain pair-containing.
  
 
 0.813
GSU3474
Hypothetical protein.
       0.762
GSU0125
Protein of unknown function DUF162.
  
 
 0.656
GSU1621
Protein of unknown function, DUF162-containing.
  
 
 0.622
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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