Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GSU0093ABC transporter, ATP-binding/membrane protein. (590 aa)    
Predicted Functional Partners:
GSU0101
ABC transporter, ATP-binding/membrane protein.
 
 
 
0.933
GSU1677
Long-chain acyl-CoA synthetase; Acyl-(acyl carrier protein) ligase, acyl carrier, [acyl-]glycerolphosphate acyltransferase fusion protein.
  
 
 0.896
GSU0277
ABC transporter, ATP-binding/membrane protein.
 
 
0.767
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.650
GSU2745
ATPase, AAA family.
 
 0.643
GSU0036
Poly-gamma-glutamate capsule biosynthesis protein, putative.
   
    0.620
GSU1222
Histone deacetylase family protein.
   
 0.616
GSU0972
ATPase, AAA family.
   
 0.605
rbbA
Ribosome-associated ATPase and membrane protein RbbA.
  
 0.596
hrpB
ATP-dependent helicase HrpB.
    
  0.562
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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