Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GSU0179Flavodoxin, putative. (211 aa)    
Predicted Functional Partners:
GSU0180
Hypothetical protein.
  
    0.795
hxlR
Helix-turn-helix transcriptional regulator HxlR.
 
    0.727
GSU0528
Ferredoxin and NADH nitroreductase domain protein.
 
  
 0.662
GSU1408
MRP-like NifH superfamily NTPase; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
   
    0.613
GSU1464
LysM domain lipoprotein.
   
  
 0.582
GSU1416
Iron-sulfur cluster-binding flavodoxin.
 
     0.499
prkA
Protein serine/threonine kinase PrkA.
   
    0.457
GSU3344
ATPase, AAA family.
   
    0.457
GSU0272
Hypothetical protein.
   
    0.456
GSU3386
Lipoprotein, putative.
   
    0.456
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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