STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gspNType II secretion system protein GspN, putative. (279 aa)    
Predicted Functional Partners:
gspM
Type II secretion system protein GspM, putative.
  
    0.813
gspJ
Type II secretion system minor pseudopilin GspJ.
  
    0.795
gspL
Type II secretion system protein GspL, putative.
  
    0.792
gspK
Type II secretion system minor pseudopilin GspK.
  
    0.790
gspH
Type II secretion system minor pseudopilin GspH.
  
    0.787
gspI
Type II secretion system minor pseudopilin GspI.
  
    0.780
gspG
Type II secretion system major pseudopilin GspG.
  
    0.778
gspF
Type II secretion system inner membrane protein GspF.
  
    0.704
gspE
Type II secretion system ATPase GspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
    0.697
gspD
Type II secretion system lipoprotein GspD, putative.
       0.673
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.