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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU0366Helix-turn-helix XRE domain protein. (306 aa)    
Predicted Functional Partners:
yhcC-1
Radical SAM domain iron-sulfur cluster-binding oxidoreductase, TIGR01212 family.
  
    0.789
GSU1806
YbbR domain protein.
  
     0.761
GSU0317
Hypothetical protein.
  
     0.727
GSU0899
Hypothetical protein.
  
    0.706
GSU0698
HEAT-like repeat-containing protein.
  
    0.664
GSU1863
Transcriptional regulator, Ros/MucR family.
  
   
 0.654
GSU2941
Helix-turn-helix transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
  
 0.654
GSU0625
Helix-turn-helix transcriptional regulator, putative.
   
 
 0.637
sbcC-2
DNA repair exonuclease SbcCD, C subunit, putative.
 
  
 0.636
GSU2523
Helix-turn-helix transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
   
  
 0.629
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.