STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU0390Protein of unknown function DUF2062. (160 aa)    
Predicted Functional Partners:
GSU0391
Efflux pump, RND family, outer membrane protein.
       0.482
GSU0392
Efflux pump, RND family, membrane fusion lipoprotein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.482
GSU0396
Protein of unknown function DUF2892.
 
     0.481
GSU3306
Hypothetical protein.
  
    0.450
GSU0393
Hypothetical protein.
       0.415
GSU0394
Efflux pump, RND family, inner membrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.415
GSU0395
Redox-active protein, C_GCAxxG_C_C family, putative.
       0.415
GSU0397
Metal-dependent hydrolase, beta-lactamase superfamily II.
       0.401
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.