STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU0391Efflux pump, RND family, outer membrane protein. (447 aa)    
Predicted Functional Partners:
GSU0392
Efflux pump, RND family, membrane fusion lipoprotein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.972
GSU0394
Efflux pump, RND family, inner membrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.926
GSU0396
Protein of unknown function DUF2892.
 
    0.751
GSU1481
Multidrug resistance efflux pump, RND family, membrane fusion protein EmrA.
 
 
 0.739
GSU2665
Efflux pump, RND family, membrane fusion lipoprotein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.703
GSU3399
Efflux pump, RND family, membrane fusion lipoprotein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.675
GSU0395
Redox-active protein, C_GCAxxG_C_C family, putative.
       0.656
GSU0393
Hypothetical protein.
  
    0.654
ybhG
Efflux pump, RND family, membrane fusion protein.
 
 
 0.654
GSU2136
Efflux pump, RND family, membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.653
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.