STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU0596Response receiver; Domains: REC. (130 aa)    
Predicted Functional Partners:
GSU0597
Hypothetical protein.
  
    0.792
GSU0593
Cytochrome b, putative.
  
    0.719
GSU0594
Cytochrome c; 7 heme-binding sites.
  
    0.689
GSU3489
Hypothetical protein.
       0.590
GSU1302
Sensor histidine kinase response regulator, HAMP domain-containing, putative heme-binding site; Domains: HAMP, HisKA, HATPase_c, REC.
  
 
 0.515
GSU1768
ParA family protein.
  
 
 0.488
flhG
Flagellar biogenesis ATPase FlhG.
  
 
 0.488
GSU1990
Sensor histidine kinase, NtrB-related protein; Domains: HisKA, HATPase_c.
  
 
 0.472
GSU3278
Pentapeptide repeat protein.
  
 
 0.428
gnfL
Nitrogen fixation master sensor histidine kinase, PAS domain-containing; Domains: PAS, HisKA, HATPase_c.
  
 
 0.409
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.