Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GSU0680DUF748 repeat protein. (1187 aa)    
Predicted Functional Partners:
flgE
Flagellar hook protein FlgE.
   
 
 0.795
flgC
Flagellar basal body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
   0.716
GSU0415
Hypothetical protein.
   
   0.648
fliM
Flagellar motor switch protein FliM.
  
  
 0.641
flgK
Flagellar hook-associated protein FlgK.
   
  
 0.639
GSU3033
PilZ domain protein.
   
    0.626
GSU2907
Membrane protein DUF318.
   
    0.620
fliF
Flagellar M-ring mounting plate protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
   
 
 0.595
flgG
Flagellar basal body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
   
   0.563
GSU0679
SAM-dependent methyltransferase.
  
    0.561
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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