Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GSU0729Iron-sulfur cluster-binding oxidoreductase. (224 aa)    
Predicted Functional Partners:
GSU0358
Periplasmic nitrate reductase, iron-sulfur cluster-binding subunit, putative.
 
 
 0.739
lpxC
UDP-3-O-acyl-N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.
  
    0.514
GSU0494
DUF362 iron-sulfur cluster-binding domain protein.
 
 
 0.508
GSU2513
Lipoprotein cytochrome c, 1 heme-binding site.
  
  
 0.508
GSU2638
Membrane protein of unknown function DUF456.
   
    0.460
GSU0528
Ferredoxin and NADH nitroreductase domain protein.
 
 
 0.454
GSU0819
FMN-dependent polypeptide cyclic thioester oxidase, putative.
   
    0.453
GSU0188
Hypothetical protein.
  
    0.443
GSU2925
(R)-2-hydroxyacyl-CoA dehydratase.
 
     0.433
GSU2967
Ferritin-like domain protein.
 
    0.432
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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