Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GSU0771NADPH:quinone oxidoreductase family protein. (335 aa)    
Predicted Functional Partners:
pta
Phosphate acetyltransferase.
 
 
 0.922
GSU1451
Glyoxalate/3-oxopropanoate/4-oxobutanoate reductase-related protein.
  
 
  0.830
ghr
Glyoxalate/3-oxopropanoate/4-oxobutanoate reductase.
  
 
  0.825
GSU3029
[acyl-]glycerolphosphate acyltransferase and acyl-(acyl carrier protein) ligase, major facilitator superfamily domain-containing.
  
 
 0.668
GSU0229
acyl-CoA synthetase, AMP-forming.
 
 
 0.579
GSU1677
Long-chain acyl-CoA synthetase; Acyl-(acyl carrier protein) ligase, acyl carrier, [acyl-]glycerolphosphate acyltransferase fusion protein.
  
 
 0.519
GSU0772
Flavodoxin, putative.
  
  
 0.517
GSU1103
acyl-CoA synthetase, AMP-forming.
  
 
 0.516
putA
Proline dehydrogenase and Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
 
 0.499
GSU0894
Peptidylprolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
 0.465
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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