Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GSU0797Membrane protein, MarC family. (202 aa)    
Predicted Functional Partners:
GSU0798
Amino acid ABC transporter, ATP-binding protein.
  
    0.782
GSU0799
ABC transporter, membrane protein.
  
    0.780
GSU0796
Long-chain acyl-CoA thioesterase, BFIT_BACH family.
  
    0.743
GSU0800
Amino acid ABC transporter, periplasmic amino acid-binding protein.
       0.488
GSU0794
FAD-dependent pyridine nucleotide-disulfide oxidoreductase family protein, rhodanese homology domain-containing.
 
     0.432
GSU0795
Rhodanese homology domain superfamily protein.
       0.429
GSU3508
Hypothetical protein.
       0.429
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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