STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU0809Carbonic anhydrase, beta-family, clade D. (181 aa)    
Predicted Functional Partners:
can-1
Carbonic anhydrase, beta-family, clade B.
     
  0.900
GSU1442
Carbonic anhydrase, beta-family, clade C.
     
  0.900
can-2
Carbonic anhydrase, beta-family, clade B; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
     
  0.900
fdhC
Bidirectional formate transporter, putative.
 
    0.748
GSU0808
Diguanylate cyclase, CAP_ED domain-containing; Domains: CAP_ED, GGDEF.
  
    0.715
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.581
GSU0810
Peptidoglycan-binding outer membrane protein, OMP_b-brl, OmpA and OmpA domain-containing; Domains: OMP_b-brl, OmpA, OmpA.
       0.498
yrdA
Protein of unknown function YrdA, isoleucine patch superfamily of carbonic anhydrases/acetyltransferases.
    
 
 0.493
GSU1973
Acyltransferase, left-handed parallel beta-helix (hexapeptide repeat) family.
    
 
 0.493
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 
 0.406
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.