Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GSU0845Ferredoxin, Rieske superfamily. (103 aa)    
Predicted Functional Partners:
hemD
Uroporphyrinogen III C2,C7-methyltransferase and uroporphyrinogen III synthase.
  
  
 0.885
GSU0843
Rubredoxin reductase.
  
 
 0.822
GSU0844
Transporter, putative.
  
    0.776
nifU
Nitrogen fixation iron-sulfur cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
  
 0.739
acnA
Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
    0.735
GSU3265
Sulfite reductase, assimilatory; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 0.722
GSU2095
FAD-dependent pyridine nucleotide-disulfide oxidoreductase family protein.
 
  
 0.720
GSU0909
FAD-dependent pyridine nucleotide-disulfide oxidoreductase family protein.
  
  
 0.680
GSU1237
FAD-dependent pyridine nucleotide-disulfide oxidoreductase family protein.
  
  
 0.680
GSU0794
FAD-dependent pyridine nucleotide-disulfide oxidoreductase family protein, rhodanese homology domain-containing.
  
 
 0.643
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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