Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GSU0871Radical SAM domain iron-sulfur cluster-binding oxidoreductase with cobalamin-binding-like domain and TPR domain. (554 aa)    
Predicted Functional Partners:
GSU0870
NUDIX hydrolase, MutT family.
  
    0.773
GSU0869
Protein of unknown function, LysM, LysM and NLPC_P60 domain-containing; Domains: LysM, LysM, NLPC_P60.
  
    0.590
GSU2417
Hypothetical protein; mvhR.
  
  
 0.544
GSU0548
Radical SAM domain iron-sulfur cluster-binding oxidoreductase with cobalamin-binding-like domain.
  
     0.427
dacA
Diadenylate cyclase, YbbR and YbbR domain-containing; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
       0.405
GSU0991
Glycosyltransferase, ExpC-like family.
  
    0.402
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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