Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amtBAmmonium transporter. (489 aa)    
Predicted Functional Partners:
glnK
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 
 0.999
nifK
Nitrogenase molybdenum-iron protein, beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
   
  
 0.999
glnB
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 
 0.993
nifB
Nitrogenase molybdenum-iron cofactor biosynthesis protein NifB.
   
  
 0.988
nifX
Nitrogenase molybdenum-iron cofactor biosynthesis protein NifX.
   
  
 0.965
nifD
Nitrogenase molybdenum-iron protein, alpha chain.
   
  
 0.962
nifH
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
  
  
 0.961
nifEN
Nitrogenase molybdenum-iron cofactor biosynthesis protein NifEN; Belongs to the NifD/NifK/NifE/NifN family.
   
  
 0.960
gnfK
Nitrogen fixation transcript antitermination sensor histidine kinase; Domains: HisKA, HATPase_c.
  
   0.957
gnfR
Nitrogen fixation transcript antitermination response regulator, ANTAR domain-containing; Domains: REC, ANTAR.
  
  
 0.951
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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