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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU0989NHL repeat domain protein. (669 aa)    
Predicted Functional Partners:
GSU0986
Phage baseplate outer wedge protein (acidic lysozyme), putative.
 
 
 0.997
GSU0975
Phage tail sheath protein, putative.
 
 
 0.995
GSU0982
Phage protein D, putative.
 
  
 0.981
GSU0988
Hypothetical protein.
 
    0.954
GSU0987
Hypothetical protein.
 
    0.942
GSU0990
Hypothetical protein.
 
  
 0.927
GSU0981
Hypothetical protein.
 
  
 0.886
GSU0972
ATPase, AAA family.
 
    0.872
GSU0979
Phage tail tube protein gp19, putative.
 
    0.851
GSU0977
Hypothetical protein.
 
    0.850
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.