Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GSU1012Membrane protein of unknown function DUF401. (404 aa)    
Predicted Functional Partners:
GSU1013
Peptidoglycan-binding lipoprotein, OmpA family.
  
    0.547
GSU1011
TPR domain protein.
  
    0.531
GSU1014
Smr domain protein.
       0.529
GSU1015
Hypothetical protein.
  
    0.466
GSU1016
AspT family membrane protein, TrkA-C domain pair-containing.
  
    0.455
GSU1548
Hypothetical protein.
  
    0.446
GSU1010
Lytic transglycosylase, SLT, LysM and LysM domain-containing; Domains: SLT, LysM, LysM.
  
    0.442
hflX
GTPase, HflX subfamily; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.
 
    0.406
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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