Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GSU1016AspT family membrane protein, TrkA-C domain pair-containing. (546 aa)    
Predicted Functional Partners:
GSU1015
Hypothetical protein.
  
    0.773
GSU1014
Smr domain protein.
  
    0.653
GSU1013
Peptidoglycan-binding lipoprotein, OmpA family.
       0.631
GSU1017
Hypoxanthine/guanine phosphoribosyltransferase, putative.
  
    0.489
GSU1012
Membrane protein of unknown function DUF401.
  
    0.455
dcuB
Anaerobic C4-dicarboxylate antiporter, Dcu family; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.
  
    0.400
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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