STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tusA-2tRNA (5-carboxymethylaminomethyl-2-thio-U34) synthesis sulfur carrier protein. (85 aa)    
Predicted Functional Partners:
GSU1055
Membrane protein of unknown function DUF395, YeeE/YedE-related protein.
  
  
 0.812
GSU1053
Sensor protein, PAS and PAS domain-containing; Domains: PAS, PAS.
  
    0.782
GSU1052
Hydrolase or acyltransferase, alpha/beta fold family.
       0.773
nifS-1
Nitrogen fixation iron-sulfur cluster assembly cysteine desulfurase NifS; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.
  
 
 0.770
nifS-2
Nitrogen fixation iron-sulfur cluster assembly cysteine desulfurase NifS.
   
 
 0.767
dndA
Cysteine desulfurase.
   
 
 0.767
cysN
Sulfate adenylyltransferase, subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
  
 0.658
GSU1974
Aminotransferase, AHBA_syn family; Belongs to the DegT/DnrJ/EryC1 family.
   
  
 0.485
GSU1250
Sigma-54-dependent transcriptional response regulator; Domains: REC, sigma54 interaction, HTH8.
   
    0.483
cheC44H
Protein phosphoaspartate phosphatase CheC associated with MCPs of class 44H.
   
   0.443
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.