STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU1069Protein of unknown function DUF485. (102 aa)    
Predicted Functional Partners:
aplA
Sodium/solute symporter family protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.971
aplB
Sodium/solute symporter family protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.880
aplC
Sodium/solute symporter family protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.878
GSU1067
Nucleotidyltransferase DUF294, putative.
 
  
 0.820
aplD
Sodium/solute symporter family protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.735
GSU0517
Nucleotidyltransferase DUF294, putative.
 
  
 0.464
GSU1071
Protein of unknown function DUF485.
  
   
0.461
GSU3030
Metal-dependent hydrolase superfamily protein.
  
    0.440
GSU1247
Hypothetical protein.
  
     0.409
GSU3386
Lipoprotein, putative.
  
    0.407
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.