STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU1117Response regulator, putative; Domains: REC. (127 aa)    
Predicted Functional Partners:
gnfL
Nitrogen fixation master sensor histidine kinase, PAS domain-containing; Domains: PAS, HisKA, HATPase_c.
 
 
 0.874
GSU3263
Response regulator, PilZ domain-containing; Domains: REC, PilZ.
 
 
 0.843
gnfK
Nitrogen fixation transcript antitermination sensor histidine kinase; Domains: HisKA, HATPase_c.
 
 
 0.803
usp-2
Universal stress protein Usp.
  
  
 0.800
GSU1878
Sensor histidine kinase; Domains: HisKA, HATPase_c.
 
 
 
 0.795
GSU0283
Sensor histidine kinase, GAF and GAF domain-containing, nonconserved putative heme-binding site; Domains: GAF, GAF, HisKA, HATPase_c.
 
 
 
 0.793
GSU0471
Sensor histidine kinase; Domains: HisKA, HATPase_c.
 
 
 0.793
GSU1302
Sensor histidine kinase response regulator, HAMP domain-containing, putative heme-binding site; Domains: HAMP, HisKA, HATPase_c, REC.
 
 
 0.793
GSU1319
Sensor histidine kinase; Domains: HisKA, HATPase_c.
 
 
 0.793
GSU3138
Response receiver histidine kinase; Domains: REC, HisKA, HATPase_c.
 
 
 0.793
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.