STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU1128acyl-CoA thioesterase. (147 aa)    
Predicted Functional Partners:
GSU1127
Hypothetical protein.
  
    0.603
GSU1126
uracil-DNA glycosylase.
       0.591
GSU0796
Long-chain acyl-CoA thioesterase, BFIT_BACH family.
     
 0.578
GSU3293
Ferritin-like domain protein.
  
     0.573
GSU1677
Long-chain acyl-CoA synthetase; Acyl-(acyl carrier protein) ligase, acyl carrier, [acyl-]glycerolphosphate acyltransferase fusion protein.
  
 
 0.567
GSU3451
Hydrolase, putative.
    
 0.552
plsX
Acyl-(acyl carrier protein)--phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
  
  
 0.488
GSU3029
[acyl-]glycerolphosphate acyltransferase and acyl-(acyl carrier protein) ligase, major facilitator superfamily domain-containing.
  
  
 0.450
GSU1125
Hypothetical protein.
       0.435
GSU2491
Membrane protein, major facilitator superfamily.
 
   
 0.426
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
Server load: medium (72%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.