STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU1154Surface repeat protein, putative. (4713 aa)    
Predicted Functional Partners:
GSU1153
Outer membrane lipoprotein.
 
  
 0.921
GSU3112
FtsK/SpoIIIE domain protein.
   
 
 0.536
yyaL
Thioredoxin domain protein YyaL.
   
 
 0.527
GSU0891
Serine protease, subtilase family, DUF11 domain-containing.
  
 
 0.523
GSU1677
Long-chain acyl-CoA synthetase; Acyl-(acyl carrier protein) ligase, acyl carrier, [acyl-]glycerolphosphate acyltransferase fusion protein.
   
 
 0.513
GSU2075
Serine protease, subtilase family; Belongs to the peptidase S8 family.
  
 
 0.513
ctpA-1
Periplasmic carboxy-terminal processing protease lipoprotein; Belongs to the peptidase S41A family.
  
   0.502
ctpA-2
Periplasmic carboxy-terminal processing protease lipoprotein; Belongs to the peptidase S41A family.
  
   0.501
acpP-1
Acyl carrier protein.
   
 
 0.495
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 
 0.494
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.