STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU1257Cytochrome c and periplasmic receptor, 1 heme-binding site. (541 aa)    
Predicted Functional Partners:
GSU1256
SCO family protein.
 
    0.941
GSU1253
Hypothetical protein.
 
  
 0.940
GSU1255
SCO family protein.
 
     0.931
GSU1252
Multicopper oxidase with phosphopantotheine attachment site.
 
    0.907
GSU1251
ATS1 domain repeat protein.
 
  
 0.840
gnfR
Nitrogen fixation transcript antitermination response regulator, ANTAR domain-containing; Domains: REC, ANTAR.
  
 
 0.792
GSU1254
Hypothetical protein.
  
    0.716
ompC
Multicopper oxidase, manganese oxidase family.
 
  
 0.667
ompB
Laccase family multicopper oxidase.
  
   
 0.658
GSU1844
IPT/TIG domain protein.
  
     0.651
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.