STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsbWAnti-sigma factor, protein serine/threonine kinase. (149 aa)    
Predicted Functional Partners:
rsbV
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.998
GSU3526
STAS domain protein.
  
 
 0.972
GSU1429
Sodium/solute symporter, GAF and PP2C family protein serine/threonine phosphatase domain protein.
 
 
 0.948
GSU0700
Phosphoserine phosphatase RsbU/P; Domains: REC, PAS, PAS, PP2C.
 
 
 0.946
flgB
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
   
    0.943
fliG
Flagellar motor switch protein FliG.
   
    0.943
GSU0415
Hypothetical protein.
   
    0.943
motA
Flagellar basal body stator protein MotA.
   
    0.943
flgK
Flagellar hook-associated protein FlgK.
   
    0.943
flgH
Flagellar L-ring lipoprotein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
    0.943
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.