STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsbVAnti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family. (111 aa)    
Predicted Functional Partners:
rsbW
Anti-sigma factor, protein serine/threonine kinase.
 
 
 0.998
GSU1429
Sodium/solute symporter, GAF and PP2C family protein serine/threonine phosphatase domain protein.
 
 
 0.964
GSU2345
Serine phosphatase, SpoIIE domain-containing.
 
 
 0.949
flgE
Flagellar hook protein FlgE.
   
    0.943
GSU0700
Phosphoserine phosphatase RsbU/P; Domains: REC, PAS, PAS, PP2C.
 
 
 0.941
fliG
Flagellar motor switch protein FliG.
  
   0.905
GSU2314
Sensor histidine kinase response regulator; Domains: DUF3365, PAS, PAS, HisKA, HATPase_c, REC, Hpt.
 
  
 0.903
flgH
Flagellar L-ring lipoprotein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
    0.892
GSU1302
Sensor histidine kinase response regulator, HAMP domain-containing, putative heme-binding site; Domains: HAMP, HisKA, HATPase_c, REC.
  
  
 0.891
GSU2575
Sensor histidine kinase response regulator, Hpt domain-containing; Domains: HisKA, HATPase_c, REC, Hpt.
 
  
 0.888
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.