STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU1478Protein of unknown function DUF477. (289 aa)    
Predicted Functional Partners:
GSU1477
LemA family lipoprotein.
 
  
 0.957
GSU1479
Hypothetical protein.
 
    0.951
coxA
Cytochrome c oxidase, coo3-type, cytochrome o subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
  
   0.859
coxC
Cytochrome c oxidase, coo3-type, subunit III.
   
   0.831
GSU1284
Cytochrome c, 1 heme-binding site.
  
 
   0.823
GSU1650
Cytochrome b/b6 complex, iron-sulfur cluster-binding subunit.
  
   0.821
GSU2933
Cytochrome b/b6 complex, iron-sulfur cluster-binding subunit.
  
   0.821
coxB
Cytochrome c oxidase, coo3-type, cytochrome c subunit II, one heme-binding site; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
   0.820
GSU0746
Cytochrome p460, 1 heme-binding site.
  
 
   0.819
GSU1160
Hypothetical protein.
    
   0.817
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.