Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
xapEPhosphoglycosyl-diphosphate--polyprenyl- phosphate phosphoglycosyltransferase, putative; Belongs to the UbiA prenyltransferase family. (284 aa)    
Predicted Functional Partners:
xapD
ABC transporter, ATP-binding protein.
  
   0.855
xapA
Membrane protein, putative.
 
    0.823
xapF
Glycosyltransferase.
 
    0.818
GSU1500
Hypothetical protein; xapC.
  
    0.817
xapB
Membrane protein, putative.
  
    0.813
xapG
ABC transporter, membrane protein, ABC-2 family.
  
    0.799
xapH
ABC transporter, ATP-binding protein.
  
    0.790
xapJ
ADP-heptose--lipopolysaccharide heptosyltransferase, putative.
  
    0.786
xapI
SAM-dependent methyltransferase, FkbM family.
  
    0.781
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
  
    0.603
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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