STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU1621Protein of unknown function, DUF162-containing. (167 aa)    
Predicted Functional Partners:
GSU1620
Protein of unknown function, DUF162 and CCG domain pair-containing.
 
 
 0.999
glcF-2
D-lactate/glycolate dehydrogenase, iron-sulfur cluster-binding protein, putative.
 
 
 0.942
glcF-1
D-lactate/glycolate dehydrogenase, iron-sulfur cluster-binding protein, putative.
 
 
 0.924
GSU0125
Protein of unknown function DUF162.
  
 
 0.909
GSU1622
D-lactate/L-lactate/glycolate transporter, putative; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.835
hdrB
Heterodisulfide oxidoreductase, CCG domain pair-containing subunit B.
  
 
 0.774
hdrE
Heterodisulfide oxidoreductase, iron-sulfur cluster-binding subunit E.
  
 
 0.702
GSU2517
Iron-sulfur cluster-binding oxidoreductase, putative, rhodanese homology domain pair-containing.
  
 
 0.698
GSU2795
Electron transfer flavoprotein-associated cytochrome b and iron-sulfur cluster-binding oxidoreductase.
  
 
 0.698
putA
Proline dehydrogenase and Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
 
  
 0.677
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.