STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hprAHydroxypyruvate reductase, putative; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (327 aa)    
Predicted Functional Partners:
glcD-2
D-lactate/glycolate dehydrogenase, FAD-binding protein, putative.
   
 0.928
glcD-1
D-lactate/glycolate dehydrogenase, FAD-binding protein, putative.
   
 0.928
GSU2192
HAD superfamily hydrolase.
 
  
 0.918
glcF-2
D-lactate/glycolate dehydrogenase, iron-sulfur cluster-binding protein, putative.
  
 
 0.909
glcF-1
D-lactate/glycolate dehydrogenase, iron-sulfur cluster-binding protein, putative.
    
 0.909
cinA
Molybdopterin-binding domain nicotinamide nucleotide amidohydrolase, putative; Belongs to the CinA family.
  
    0.821
maeB
Malate oxidoreductase, NADP-dependent, phosphate acetyltransferase-like domain-containing.
   
 
 0.573
kdsD
Arabinose-5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily.
   
 
 0.569
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.555
flaG
Flagellar protein FlaG.
  
   0.548
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.