STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU1743Lipoprotein, putative. (213 aa)    
Predicted Functional Partners:
GSU1742
Sodium/phosphate symporter, putative.
  
    0.749
gppA-1
pppGpp 5'-phosphohydrolase and exopolyphosphatase, putative.
       0.741
GSU1745
Peptidoglycan-binding protein, OmpA family.
  
    0.611
GSU1744
Hypothetical protein.
  
    0.522
GSU1155
Glutaredoxin family protein.
   
    0.483
GSU3397
Hypothetical protein.
   
    0.456
ihfB-1
Integration host factor, beta subunit; Belongs to the bacterial histone-like protein family.
  
    0.428
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.