STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pulQType II secretion system secretin lipoprotein PulQ; Belongs to the bacterial secretin family. (822 aa)    
Predicted Functional Partners:
pulE
Type II secretion system ATPase PulE.
 
 
 0.968
pulM
Type II secretion system ATPase PulM, putative.
 
 
 0.957
pulG
Type II secretion system pseudopilin PulG.
 
  
 0.954
pilN
Type IV pilus biogenesis protein PilN.
 
 
 0.949
oxpG
Type II secretion system pseudopilin OxpG.
 
  
 0.947
pilM
Type IV pilus biogenesis ATPase PilM.
 
 
 0.930
gspD
Type II secretion system lipoprotein GspD, putative.
 
 
0.924
pilP
Type IV pilus assembly lipoprotein PilP.
 
 
 0.922
pulO
Type II secretion system protein PulO, putative.
  
 
 0.903
pilO
Type IV pilus biogenesis protein PilO.
 
 
 0.899
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.