node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GSU0443 | GSU1200 | GSU0443 | GSU1200 | Ribonuclease D, putative. | RNA-binding S1 domain protein. | 0.943 |
GSU0443 | hrpB | GSU0443 | GSU1838 | Ribonuclease D, putative. | ATP-dependent helicase HrpB. | 0.963 |
GSU0443 | rnr | GSU0443 | GSU1485 | Ribonuclease D, putative. | Exoribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.897 |
GSU0443 | rph | GSU0443 | GSU1795 | Ribonuclease D, putative. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.972 |
GSU0443 | rpsD | GSU0443 | GSU2832 | Ribonuclease D, putative. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.948 |
GSU0443 | rpsK | GSU0443 | GSU2833 | Ribonuclease D, putative. | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.943 |
GSU0443 | ylxRQ | GSU0443 | GSU1587 | Ribonuclease D, putative. | RNA-binding protein YlxRQ, putative. | 0.940 |
GSU1200 | GSU0443 | GSU1200 | GSU0443 | RNA-binding S1 domain protein. | Ribonuclease D, putative. | 0.943 |
GSU1200 | hrpB | GSU1200 | GSU1838 | RNA-binding S1 domain protein. | ATP-dependent helicase HrpB. | 0.895 |
GSU1200 | rnr | GSU1200 | GSU1485 | RNA-binding S1 domain protein. | Exoribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.678 |
GSU1200 | rph | GSU1200 | GSU1795 | RNA-binding S1 domain protein. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.816 |
GSU1200 | rpsD | GSU1200 | GSU2832 | RNA-binding S1 domain protein. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.990 |
GSU1200 | rpsK | GSU1200 | GSU2833 | RNA-binding S1 domain protein. | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.995 |
GSU1200 | ylxRQ | GSU1200 | GSU1587 | RNA-binding S1 domain protein. | RNA-binding protein YlxRQ, putative. | 0.870 |
GSU2167 | rph | GSU2167 | GSU1795 | CHC2 zinc finger domain protein. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.827 |
dnaG | rph | GSU3090 | GSU1795 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.830 |
dnaG | rpsD | GSU3090 | GSU2832 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.465 |
dnaG | rpsK | GSU3090 | GSU2833 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.527 |
hrpB | GSU0443 | GSU1838 | GSU0443 | ATP-dependent helicase HrpB. | Ribonuclease D, putative. | 0.963 |
hrpB | GSU1200 | GSU1838 | GSU1200 | ATP-dependent helicase HrpB. | RNA-binding S1 domain protein. | 0.895 |